Mass spectrometry data analysis

Send us your data and tell us what you need to learn from it. We run it through the SpectraStrata analysis pipeline, the science is verified, and you can access, view and print your results through our client portal. From untargeted metabolomics to stable-isotope tracing.

Specialized Workflows

We match each project to the workflow built for that kind of experiment.

Untargeted Metabolomics

Feature detection, multi-group statistics (ANOVA/Kruskal-Wallis), formula annotation, MS2 fragmentation, and molecular networking.

Isotope Pairing

Detect 12C/13C feature pairs from stable isotope experiments. Degradation network mapping, time-course degradation tracking, two-phase discovery mode, unknowns identification, and plausible structure elucidation.

Protein Modification

Intact mass deconvolution, tryptic digest search, MS2 site localization, and combinatorial dual-modification b/y ion scoring.

Lipidomics

Lipid class prediction from MS1 + MS2 evidence across 14 classes (PC, PE, SM, TG, Cer, and more). Acyl chain composition analysis.

Glycomics

Glycan composition prediction with biosynthetic validation rules. Oxonium ion scoring for high mannose, complex, hybrid, and O-glycan types.

13C Metabolic Flux Analysis

ODE-based flux estimation from 13C tracer experiments. Per-timepoint MID extraction, stoichiometric matrix construction, and mass balance validation.

How it works

1

Send us your data

Share your raw files and sample details, and tell us the question your experiment is asking.

2

We process and review

We run your data through the workflow that fits your experiment, and the science is verified before the results reach you.

3

Access your results

Access, view and print your data through our client portal: reports, annotated data tables, and publication-quality plots.

Have data to analyze?

Tell us about your experiment and we'll run the analysis, verify the science, and deliver your results.

Ready to run an experiment?

We can help you plan and design it so you get the results you need.

Start a project